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DCB Publications
Peter Steinbach
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Hassan SA, Gracia L, Vasudevan G, Steinbach PJ "Computer Simulation of Protein-Ligand Interactions: Challenges and Applications." Protein-Ligand Interactions: Methods and Applications Nienhaus, G. Ulrich, editor. Humana Press. pp. 451-492 (2005)
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J. Tang, S. Stern-Nezer, P.-C. Liu, L. Matyakhina, M. Riordan, N.L.C. Luban, P.J. Steinbach & S.G. Kaler
"Mutation in the Leucine-rich Repeat C-flanking Region of Platelet Glycoprotein Ib-beta Impairs Assembly of von Willebrand Factor Receptor."
Thromb. Haemost. 92: 75-88
[PubMed]
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P.J. Steinbach "Exploring Peptide Energy Landscapes: A Test of Force Fields and Implicit Solvent Models." Proteins Struct. Funct. Bioinform. 57: 665-677
[PubMed]
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P.J. Steinbach, R. Ionescu, & C.R. Matthews"Analysis of Kinetics using a Hybrid Maximum-Entropy / Nonlinear-Least-Squares Method: Application to Protein Folding." Biophys. J. 82: 2244-2255
[PubMed]
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P.J. Steinbach"Inferring Lifetime Distributions from Kinetics by Maximizing Entropy Using a Bootstrapped Model." J. Chem. Inf. Comput. Sci. 42: 1476-1478
[PubMed]
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Dhanvantari S, Arnaoutova I, Snell CR, Steinbach PJ, Hammond K, Caputo GA, London E, Loh YP"Carboxypeptidase E, a prohormone sorting receptor, is anchored to secretory granules via a C-terminal transmembrane insertion." Biochemistry 41: 52-60
[PubMed]
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R. Chu, J. Takei, J.R. Knowlton, M. Andrykovitch, W. Pei, A.V. Kajava, P.J. Steinbach, X. Ji & Y. Bai"Redesign of a Four-helix Bundle Protein by Phage Display Coupled with Proteolysis and Structural Characterization by NMR and X-ray Crystallography." J. Mol. Biol. 323: 253-62
[PubMed]
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L.J. Lapidus, P.J. Steinbach, W.A. Eaton, A. Szabo & J. Hofrichter
"Effects of Chain Stiffness on the Dynamics of Loop Formation in Polypeptides." J. Phys. Chem. B 106: 11628-11640
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G. Reyes-Cruz, J. Hu, P.K. Goldsmith, P.J. Steinbach, & A.M. Spiegel"Human Ca Receptor Extracellular Domain: Analysis of Function of Lobe I Loop Deletion Mutants." J. Biol. Chem. 276: 32145-32151
[PubMed]
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J. Piatigorsky, B. Norman, L.J. Dishaw, L. Kos, J. Horwitz, P.J. Steinbach & Z. Kozmik
"J3-Crystallin of the Jellyfish Lens: Homology to Saposins." Proc. Natl. Acad. Sci. USA 98: 12362-12367
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S. Ganguly, P. Mummaneni, P.J. Steinbach, D.C. Klein & S.L.Coon"Characterization of the Saccharomyces cerevisiae Homolog of the Melatonin Rhythm Enzyme Arylalkylamine N-acetyltransferase (AANAT, EC 2.3.1.87)." J. Biol. Chem. 276: 47239-47247
[PubMed]
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J.J. Balbach, J. Yang, D.P. Weliky, P.J. Steinbach, V. Turganov, J. Anglister & R. Tycko"Probing Hydrogen Bonds in the Antibody-Bound HIV-1 gp120 V3 Loop by Solid State NMR REDOR Measurements." J. Biomol. NMR 16: 313-327
[PubMed]
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J. Piatigorsky, Z. Kozmik, J. Horwitz, L. Ding, E. Carosa, W.G. Robison, Jr., P.J. Steinbach & E.R. Tamm"Omega-Crystallin of the Scallop Lens: A Dimeric Aldehyde Dehydrogenase Class 1/2 Enzyme-Crystallin." J. Biol. Chem. 275: 41064-41073
[PubMed]
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D.P. Weliky, A.E. Bennett, A. Zvi, J. Anglister, P.J. Steinbach & R. Tycko"Solid-State NMR Evidence for an Antibody-Dependent Conformation of the V3 Loop of HIV-1 gp120." Nature Struct. Biol. 6: 141-145
[PubMed]
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P. Sharma, P.J. Steinbach, M. Sharma, N.D. Amin, J.J. Barchi, Jr. & H.C. Pant"Identification of Substrate Binding Site of Cyclin-Dependent Kinase 5." J. Biol. Chem. 274: 9600-9606
[PubMed]
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K. Ray, B.C. Hauschild, P.J. Steinbach, P.K. Goldsmith, O. Hauache & A.M. Spiegel"Identification of the Cysteine Residues in the Amino-Terminal Extracellular Domain of the Human Ca Receptor Critical for Dimerization: Implications for Function of Monomeric Ca Receptor." J. Biol. Chem. 274: 27642-27650
[PubMed]
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E. Leroy, R. Boyer, G. Auburger, B. Leube, G. Ulm, E. Mezey, G. Harta, M.J. Brownstein, S. Jonnalagada, T. Chernova, A. Dehejia, C. Lavedan, T. Gasser, P.J. Steinbach, K.D. Wilkinson & M.H Polymeropoulos"The Ubiquitin Pathway in Parkinson's Disease." Nature 395: 451-452
[PubMed]
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P.J. Steinbach"Two-Dimensional Distributions of Activation Enthalpy and Entropy from Kinetics by the Maximum Entropy Method." Biophys. J. 70: 1521-1528
[PubMed]
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P.J. Steinbach & B.R. Brooks
"Hydrated Myoglobin's Anharmonic Fluctuations are Not Primarily Due to Dihedral Transitions." Proc. Natl. Acad. Sci. USA 93: 55-59
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P.J. Steinbach & B.R. Brooks
"New Spherical-Cutoff Methods for Long-Range Forces in Macromolecular Simulation." J. Comp. Chem. 15: 667-683
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Y. Osawa, J.F. Darbyshire, P.J. Steinbach, & B.R. Brooks
"Metabolism-Based Transformation of Myoglobin to an Oxidase by BrCCl and Molecular Modeling of the Oxidase Form." J. Biol. Chem. 268: 2953-2959
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P.J. Steinbach & B.R. Brooks"Protein Hydration Elucidated by Molecular Dynamics Simulation." Proc. Natl. Acad. Sci. USA 90: 9135-9139
[PubMed]
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